PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Tp57577_TGAC_v2_mRNA24982
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Trifolium
Family G2-like
Protein Properties Length: 306aa    MW: 35646.5 Da    PI: 9.3019
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Tp57577_TGAC_v2_mRNA24982genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.33.1e-27170225155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvk.gLtlehvkSHLQkYRl 55 
                                k rlrWt+eLHe F++ v+qLGG+ekA Pk+il++m+++  Lt++hvkSHLQkYR+
  Tp57577_TGAC_v2_mRNA24982 170 KRRLRWTKELHEPFIKIVNQLGGPEKAKPKAILQMMGLDhMLTISHVKSHLQKYRS 225
                                68***********************************97359*************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.946167228IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.0E-25168228IPR009057Homeodomain-like
SuperFamilySSF466891.06E-13169227IPR009057Homeodomain-like
TIGRFAMsTIGR015575.0E-20170225IPR006447Myb domain, plants
PfamPF002491.9E-8172224IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MYINQLELYE HQSFEPYNIV TPLEATFIHD SNANETFYQH NIDIPIWNNE FCMTTKIDSP  60
FLLCQDSKDQ PTTSFHSGLE SLMCGSYEDS ISSSEKCSKF PKPICEQSRS PQQHKKMVET  120
DSAPNQKSFK ISFQRTQLES CTNQDKKSSP YGFDFATSTN FDSKITSKGK RRLRWTKELH  180
EPFIKIVNQL GGPEKAKPKA ILQMMGLDHM LTISHVKSHL QKYRSTLHTH KALKGTSEER  240
KRTDGINELQ VKIQRQIAES QQLQLEVERS NQRQLEMQRN LQLVIEQQRK QLKLMLYQQK  300
QRKQL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013467654.11e-131myb-like DNA-binding domain, shaqkyf class protein
TrEMBLA0A072VJ981e-131A0A072VJ98_MEDTR; Myb-like DNA-binding domain, shaqkyf class protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF144901016
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-29G2-like family protein